DBI / DBD / MySQL installation problem

Hi,

(sorry for fairly lengthy post)

I used to run Red Hat 9, and had a perfect relationship with Perl, DBI,
and MySQL. However, after upgrading to Fedora Core 4, I am no longer
able to connect to MySQL from Perl via DBI.

My simple test script:

---------------------------
#!/usr/bin/perl -w
use strict;
use DBI;

my $dbh =
DBI->connect("DBI:mysql:database=MyOwnDatabase;host=localhost",
"MyUserName", "MySpecialPassword",
{'RaiseError' => 1});

my $sth = $dbh->prepare("SELECT * FROM MainTable");
$sth->execute();
while (my $ref = $sth->fetchrow_hashref()) {
print "Found a row: id = $ref->{'id'}, name = $ref->{'name'}\n";
}
$sth->finish();
$dbh->disconnect();

exit;
---------------------------

[username, db, password etc check out] returns:

---------------------------
install_driver(mysql) failed: Can't locate DBD/mysql.pm in @INC (@INC
contains: /usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.5/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.4/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.6 /usr/lib/perl5/site_perl/5.8.5
/usr/lib/perl5/site_perl/5.8.4 /usr/lib/perl5/site_perl/5.8.3
/usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.6/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.5/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.4/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.6 /usr/lib/perl5/vendor_perl/5.8.5
/usr/lib/perl5/vendor_perl/5.8.4 /usr/lib/perl5/vendor_perl/5.8.3
/usr/lib/perl5/vendor_perl /usr/lib/perl5/5.8.6/i386-linux-thread-multi
/usr/lib/perl5/5.8.6 .) at (eval 1) line 3.
Perhaps the DBD::mysql perl module hasn't been fully installed,
or perhaps the capitalisation of 'mysql' isn't right.
Available drivers: DBM, ExampleP, File, Proxy, Sponge.
at test.pl line 5
---------------------------


I figured it'd be enough to upgrade DBI, so I downloaded DBI-1.48 and
installed it:


---------------------------
>perl Makefile.PL
....
>make
....
>make test
....
>make install
Files found in blib/arch: installing files in blib/lib into
architecture dependent library tree
Writing
/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI/.packlist
Appending installation info to
/usr/lib/perl5/5.8.6/i386-linux-thread-multi/perllocal.pod
---------------------------


To get the MySQL driver, I went for

>perl -MCPAN -e shell
>install Bundle::DBD::mysql

which seems to fail:

---------------------------
CPAN: Storable loaded ok
Going to read /root/.cpan/Metadata
Database was generated on Wed, 15 Jun 2005 01:57:38 GMT
DBI is up to date.
Data::ShowTable is up to date.
Running install for module Mysql
Running make for R/RU/RUDY/DBD-mysql-2.9008.tar.gz
CPAN: Digest::MD5 loaded ok
CPAN: Compress::Zlib loaded ok
Checksum for
/root/.cpan/sources/authors/id/R/RU/RUDY/DBD-mysql-2.9008.tar.gz ok
Scanning cache /root/.cpan/build for sizes
DBD-mysql-2.9008/
DBD-mysql-2.9008/t/
DBD-mysql-2.9008/t/60leaks.t
DBD-mysql-2.9008/t/40listfields.t
DBD-mysql-2.9008/t/10dsnlist.t
DBD-mysql-2.9008/t/40numrows.t
DBD-mysql-2.9008/t/30insertfetch.t
DBD-mysql-2.9008/t/00base.t
DBD-mysql-2.9008/t/insertid.t
DBD-mysql-2.9008/t/50commit.t
DBD-mysql-2.9008/t/40nulls.t
DBD-mysql-2.9008/t/dbdadmin.t
DBD-mysql-2.9008/t/lib.pl
DBD-mysql-2.9008/t/20createdrop.t
DBD-mysql-2.9008/t/mysql.dbtest
DBD-mysql-2.9008/t/40bindparam.t
DBD-mysql-2.9008/t/mysql.t
DBD-mysql-2.9008/t/40blobs.t
DBD-mysql-2.9008/t/akmisc.t
DBD-mysql-2.9008/t/50chopblanks.t
DBD-mysql-2.9008/t/ak-dbd.t
DBD-mysql-2.9008/t/mysql2.t
DBD-mysql-2.9008/lib/
DBD-mysql-2.9008/lib/DBD/
DBD-mysql-2.9008/lib/DBD/mysql/
DBD-mysql-2.9008/lib/DBD/mysql/GetInfo.pm
DBD-mysql-2.9008/lib/DBD/mysql/INSTALL.pod
DBD-mysql-2.9008/lib/DBD/mysql.pm
DBD-mysql-2.9008/lib/Bundle/
DBD-mysql-2.9008/lib/Bundle/DBD/
DBD-mysql-2.9008/lib/Bundle/DBD/mysql.pm
DBD-mysql-2.9008/lib/Mysql/
DBD-mysql-2.9008/lib/Mysql/Statement.pm
DBD-mysql-2.9008/lib/Mysql.pm
DBD-mysql-2.9008/TODO
DBD-mysql-2.9008/myld
DBD-mysql-2.9008/constants.h
DBD-mysql-2.9008/dbdimp.c
DBD-mysql-2.9008/dbdimp.h
DBD-mysql-2.9008/README
DBD-mysql-2.9008/MANIFEST.SKIP
DBD-mysql-2.9008/Makefile.PL
DBD-mysql-2.9008/META.yml
DBD-mysql-2.9008/INSTALL.html
DBD-mysql-2.9008/ChangeLog
DBD-mysql-2.9008/MANIFEST
DBD-mysql-2.9008/mysql.xs
Removing previously used /root/.cpan/build/DBD-mysql-2.9008

CPAN.pm: Going to build R/RU/RUDY/DBD-mysql-2.9008.tar.gz

I will use the following settings for compiling and testing:

cflags (mysql_config) = -I'/usr/include/mysql'
libs (mysql_config) = -L/usr/lib/mysql -lmysqlclient -lz
-lcrypt -lnsl -lm -lc -lnss_files -lnss_dns -lresolv -lc -lnss_files
-lnss_dns -lresolv
mysql_config (guessed ) = mysql_config
nocatchstderr (default ) = 0
nofoundrows (default ) = 0
ssl (guessed ) = 0
testdb (default ) = test
testhost (default ) =
testpassword (default ) =
testsocket (default ) =
testuser (default ) =

To change these settings, see 'perl Makefile.PL --help' and
'perldoc INSTALL'.

Checking if your kit is complete...
Looks good
Using DBI 1.48 (for perl 5.008006 on i386-linux-thread-multi) installed
in /usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI/
Writing Makefile for DBD::mysql
cp lib/DBD/mysql.pm blib/lib/DBD/mysql.pm
cp lib/DBD/mysql/GetInfo.pm blib/lib/DBD/mysql/GetInfo.pm
cp lib/Mysql.pm blib/lib/Mysql.pm
cp lib/DBD/mysql/INSTALL.pod blib/lib/DBD/mysql/INSTALL.pod
cp lib/Mysql/Statement.pm blib/lib/Mysql/Statement.pm
cp lib/Bundle/DBD/mysql.pm blib/lib/Bundle/DBD/mysql.pm
gcc -c
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI/
-I'/usr/include/mysql' -DDBD_MYSQL_INSERT_ID_IS_GOOD -g -D_REENTRANT
-D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe
-I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
-I/usr/include/gdbm -O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables
-DVERSION=\"2.9008\" -DXS_VERSION=\"2.9008\" -fPIC
"-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi/CORE" dbdimp.c
/usr/bin/perl -p -e "s/~DRIVER~/mysql/g"
/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI//Driver.xst
> mysql.xsi
/usr/bin/perl /usr/lib/perl5/5.8.6/ExtUtils/xsubpp -typemap
/usr/lib/perl5/5.8.6/ExtUtils/typemap mysql.xs > mysql.xsc && mv
mysql.xsc mysql.c
Warning: duplicate function definition 'do' detected in mysql.xs, line
196
Warning: duplicate function definition 'rows' detected in mysql.xs,
line 294
gcc -c
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI/
-I'/usr/include/mysql' -DDBD_MYSQL_INSERT_ID_IS_GOOD -g -D_REENTRANT
-D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe
-I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
-I/usr/include/gdbm -O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables
-DVERSION=\"2.9008\" -DXS_VERSION=\"2.9008\" -fPIC
"-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi/CORE" mysql.c
Running Mkbootstrap for DBD::mysql ()
chmod 644 mysql.bs
rm -f blib/arch/auto/DBD/mysql/mysql.so
/usr/bin/perl myld gcc -shared -L/usr/local/lib dbdimp.o mysql.o -o
blib/arch/auto/DBD/mysql/mysql.so -L/usr/lib/mysql -lmysqlclient -lz
-lcrypt -lnsl -lm -lc -lnss_files -lnss_dns -lresolv -lc -lnss_files
-lnss_dns -lresolv
/usr/bin/ld: errno: TLS definition in /lib/libc.so.6 section .tbss
mismatches non-TLS reference in
/usr/lib/mysql/libmysqlclient.a(my_malloc.o)
/lib/libc.so.6: could not read symbols: Bad value
collect2: ld returned 1 exit status
make: *** [blib/arch/auto/DBD/mysql/mysql.so] Error 1
/usr/bin/make -- NOT OK
Running make test
Can't test without successful make
Running make install
make had returned bad status, install seems impossible
Running install for module DBD::mysql
Running make for R/RU/RUDY/DBD-mysql-2.9008.tar.gz
Is already unwrapped into directory
/root/.cpan/build/DBD-mysql-2.9008
Has already been processed within this session
Running make test
Can't test without successful make
Running make install
make had returned bad status, install seems impossible
Bundle summary: The following items in bundle Bundle::DBD::mysql had
installation problems:
Mysql DBD::mysql
---------------------------

No such luch, hence. I then tried to do it by hand. I downloaded

Data-ShowTable-3.3
Msql-Mysql-modules-1.2219

from CPAN and tried to install them. They both seem to fail:

---------------------------
[root@FC4box Data-ShowTable-3.3]# perl Makefile.PL
Writing Makefile for Data::ShowTable
[root@FC4box Data-ShowTable-3.3]# make
cp showtable blib/script/showtable
/usr/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)"
blib/script/showtable
Manifying blib/man1/showtable.1
Manifying blib/man3/Data::ShowTable.3pm
*** ERROR: unterminated I<...> at line 724 in file ShowTable.pm
*** ERROR: unterminated I<...> at line 724 in file ShowTable.pm

[root@FC4box Data-ShowTable-3.3]# make test
PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e"
"test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/box-calls.........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/box-calls.........ok
t/box-scaling.......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/box-scaling.......ok
t/box-widths........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/box-widths........ok
t/box-wrap..........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/box-wrap..........ok
t/html-calls........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/html-calls........ok
t/html-fmt..........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/html-fmt..........ok
t/html-scaling......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/html-scaling......ok
t/html-widths.......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/html-widths.......ok
t/html-wrap.........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/html-wrap.........ok
t/list-calls........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/list-calls........ok
t/list-scaling......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/list-scaling......ok
t/list-widths.......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/list-widths.......ok
t/list-wrap.........Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/list-wrap.........ok
t/simple-calls......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/simple-calls......ok
t/simple-scaling....Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/simple-scaling....ok
t/simple-widths.....Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/simple-widths.....ok
t/simple-wrap.......Prototype mismatch: sub main::start_tests ($) vs
none at t/Test-Setup.pl line 27.
Prototype mismatch: sub main::run_test ($&) vs none at t/Test-Setup.pl
line 102.
t/simple-wrap.......ok
All tests successful.
Files=17, Tests=128, 3 wallclock secs ( 0.99 cusr + 0.57 csys = 1.56
CPU)
[root@FC4box Data-ShowTable-3.3]#


[root@FC4box Data-ShowTable-3.3]# make install
Writing
/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/Data/ShowTable/.packlist
Appending installation info to
/usr/lib/perl5/5.8.6/i386-linux-thread-multi/perllocal.pod
[root@FC4box Data-ShowTable-3.3]#
-------------------------------



and, for MySQL:

-------------------------------
[root@FC4box Msql-Mysql-modules-1.2219]# perl Makefile.PL
Which drivers do you want to install?

1) MySQL only
2) mSQL only (either of mSQL 1 or mSQL 2)
3) MySQL and mSQL (either of mSQL 1 or mSQL 2)

4) mSQL 1 and mSQL 2
5) MySQL, mSQL 1 and mSQL 2

Enter the appropriate number: [1]

Do you want to install the MysqlPerl emulation? You might keep
your old
Mysql module (to be distinguished from DBD::mysql!) if you are
concerned
about compatibility to existing applications! [n]

WARNING: PL_FILES takes a hash reference not a array reference.
Please inform the author.
Note (probably harmless): No library found for -lgz
Using DBI 1.48 (for perl 5.008006 on i386-linux-thread-multi) installed
in /usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI/
Writing Makefile for DBD::mysql
Writing Makefile for Msql-Mysql-modules
[root@FC4box Msql-Mysql-modules-1.2219]#


[root@FC4box Msql-Mysql-modules-1.2219]# make
make[1]: Entering directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
gcc -c
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI
-I/usr/include/mysql -I../dbd
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI
-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi -D_REENTRANT
-D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe
-I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
-I/usr/include/gdbm -O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables
-DVERSION=\"2.0419\" -DXS_VERSION=\"2.0419\" -fPIC
"-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi/CORE" -DDBD_MYSQL
dbdimp.c
gcc -c
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI
-I/usr/include/mysql -I../dbd
-I/usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi/auto/DBI
-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi -D_REENTRANT
-D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe
-I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
-I/usr/include/gdbm -O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables
-DVERSION=\"2.0419\" -DXS_VERSION=\"2.0419\" -fPIC
"-I/usr/lib/perl5/5.8.6/i386-linux-thread-multi/CORE" -DDBD_MYSQL
mysql.c
Running Mkbootstrap for DBD::mysql ()
chmod 644 mysql.bs
rm -f ../blib/arch/auto/DBD/mysql/mysql.so
gcc -shared -L/usr/local/lib dbdimp.o mysql.o -L/usr/lib/mysql -o
.../blib/arch/auto/DBD/mysql/mysql.so -L/usr/lib/mysql -lmysqlclient
-lm -lz -L/usr/lib/gcc/i386-redhat-linux/4.0.0 -lgcc
/usr/bin/ld: errno: TLS definition in /lib/libc.so.6 section .tbss
mismatches non-TLS reference in
/usr/lib/mysql/libmysqlclient.a(my_malloc.o)
/lib/libc.so.6: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[1]: *** [../blib/arch/auto/DBD/mysql/mysql.so] Error 1
make[1]: Leaving directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
make: *** [subdirs] Error 2
[root@FC4box Msql-Mysql-modules-1.2219]#


[root@FC4box Msql-Mysql-modules-1.2219]# make test
make[1]: Entering directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
rm -f ../blib/arch/auto/DBD/mysql/mysql.so
gcc -shared -L/usr/local/lib dbdimp.o mysql.o -L/usr/lib/mysql -o
.../blib/arch/auto/DBD/mysql/mysql.so -L/usr/lib/mysql -lmysqlclient
-lm -lz -L/usr/lib/gcc/i386-redhat-linux/4.0.0 -lgcc
/usr/bin/ld: errno: TLS definition in /lib/libc.so.6 section .tbss
mismatches non-TLS reference in
/usr/lib/mysql/libmysqlclient.a(my_malloc.o)
/lib/libc.so.6: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[1]: *** [../blib/arch/auto/DBD/mysql/mysql.so] Error 1
make[1]: Leaving directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
make: *** [subdirs] Error 2
[root@FC4box Msql-Mysql-modules-1.2219]#



[root@FC4box Msql-Mysql-modules-1.2219]# make install
make[1]: Entering directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
rm -f ../blib/arch/auto/DBD/mysql/mysql.so
gcc -shared -L/usr/local/lib dbdimp.o mysql.o -L/usr/lib/mysql -o
.../blib/arch/auto/DBD/mysql/mysql.so -L/usr/lib/mysql -lmysqlclient
-lm -lz -L/usr/lib/gcc/i386-redhat-linux/4.0.0 -lgcc
/usr/bin/ld: errno: TLS definition in /lib/libc.so.6 section .tbss
mismatches non-TLS reference in
/usr/lib/mysql/libmysqlclient.a(my_malloc.o)
/lib/libc.so.6: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[1]: *** [../blib/arch/auto/DBD/mysql/mysql.so] Error 1
make[1]: Leaving directory
`/home/henrik/important/Msql-Mysql-modules-1.2219/mysql'
make: *** [subdirs] Error 2
[root@FC4box Msql-Mysql-modules-1.2219]#
----------------------------------



In the end, when I run the test script above, it returns the same error
message.

I am only looking for a simple Perl <-> MySQL connection, without any
advanced features or anything "fancy". I am at a total loss what to do,
and I'd be extremely thankful for any advice you may provide.

Yours,

JA


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